BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006E09LP1|AL425552
(1002 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1220 1954 0.0
>3x_Contig1220
Length = 4729
Score = 1954 bits (985), Expect = 0.0
Identities = 998/1002 (99%), Gaps = 1/1002 (0%)
Strand = Plus / Plus
Query: 1 aagtntcggccgtacctgaatccgaaatcacatatgtttatccggagatagttggatgcg 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2310 aagtctcggccgtacctgaatccgaaatcacatatgtttatccggagatagttggatgcg 2369
Query: 61 caattctgactggtagagaaaagcatagggaattctaggcagtgccatggttatacgaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2370 caattctgactggtagagaaaagcatagggaattctaggcagtgccatggttatacgaca 2429
Query: 121 acacgacaagtacacctgatatcccttctcgaagtacaaagcataatatgaccgaaagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2430 acacgacaagtacacctgatatcccttctcgaagtacaaagcataatatgaccgaaagtg 2489
Query: 181 agagtcttgggtgtgcatattgtgcaacatgtttacggtggcttgggggaggctgtggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2490 agagtcttgggtgtgcatattgtgcaacatgtttacggtggcttgggggaggctgtggtt 2549
Query: 241 gtattaggaactgttggccggctctctcttgtggaatgttcccggctcatagatcaaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2550 gtattaggaactgttggccggctctctcttgtggaatgttcccggctcatagatcaaaat 2609
Query: 301 tcatcaactttctattttcttacgacgaagtttgttattattttttttggcatggaagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2610 tcatcaactttctattttcttacgacgaagtttgttattattttttttggcatggaagga 2669
Query: 361 acgcgatcttcagcttgaaataagttatcactgaaaaacaaagccagtagaaaacatgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2670 acgcgatcttcagcttgaaataagttatcactgaaaaacaaagccagtagaaaacatgag 2729
Query: 421 cacagtgtattctttgactctcacggctacattacaagaaatgtatctaactgtatggag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2730 cacagtgtattctttgactctcacggctacattacaagaaatgtatctaactgtatggag 2789
Query: 481 ctaatactatttgataccatactaccaaggttcatgttaacaagctagtaggtctattgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2790 ctaatactatttgataccatactaccaaggttcatgttaacaagctagtaggtctattgt 2849
Query: 541 tttctaattgtttctgtgtatattgtattccaatcggcacttacgtggcatacacggaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2850 tttctaattgtttctgtgtatattgtattccaatcggcacttacgtggcatacacggaaa 2909
Query: 601 gaaaaccaggaagaccctttttctctcatagaaagtcatgagaatcataaactgaaaaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2910 gaaaaccaggaagaccctttttctctcatagaaagtcatgagaatcataaactgaaaaga 2969
Query: 661 ggaacgatagggattcgaaccccggcttgttactgctcacctgtcaacacgtgatctcga 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2970 ggaacgatagggattcgaaccccggcttgttactgctcacctgtcaacacgtgatcccga 3029
Query: 721 cttttataaaaaagcaaaaaagcggctactactcatttctcgaaacttttcagtttgcat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3030 cttttataaaaaagcaaaaaagcggctactactcatttctcgaaacttttcagtttgcat 3089
Query: 781 gaaccctcgaaccgcgcgctcggttaccacaaacacatcacctaatatgcattagcctaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3090 gaaccctcgaaccgcgcgctcggttaccacaaacacatcacctaatatgcattagcctaa 3149
Query: 841 gctgacataatcaaaatttcgtatcctagctgtcattcatcgtaactgccaaacctcgta 900
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 3150 gctgacataatcaaaatttcgtatcctagctgtcattcatcgtaactgcc-aacctcgta 3208
Query: 901 ttgataataggcacggtactccgagcatatcactcgatagccttttcttgacccaatttt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3209 ttgataataggcacggtactccgagcatatcactcgatagccttttcttgacccaatttt 3268
Query: 961 actcgctccatcaatgtcgtatcttgaatgtatgthggttca 1002
||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3269 actcgctccatcaatgtcgtatcttgaatgtatgttggttca 3310
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6681
Number of Sequences: 1807
Number of extensions: 6681
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 1002
length of database: 10,358,551
effective HSP length: 16
effective length of query: 986
effective length of database: 10,329,639
effective search space: 10185024054
effective search space used: 10185024054
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)